‹‹ Back to SVS Home
- Installing and Initializing
- Understanding the Interface and Workflow
- Importing Your Data Into A Project
- Genetic Marker Maps and Affymetrix Library Files
- Spreadsheets
- Scripting and Other Integrated Statistical Tools
- Data Quality Assessment
- Quality Control Overview
- Genotype Statistics by Marker
- Genotype Filtering by Marker
- Genotype Statistics by Sample
- PBAT Family-Based QC Statistics
- Principal Component Analysis Overview
- Genotypic Principal Component Analysis
- Numeric Principal Component Analysis
- Correcting for Stratification by Genomic Control
- Analysis
- PBAT Family-Based Analysis
- Copy Number Analysis
- Visualizing Data
- Export Options for Data and Plots
- Formulas and Theories: The Science Behind SNP and Variation Suite
- Appendices
- EULA
- Installing the Third-Party Condor ® Package
- Extracting Affymetrix Copy Number Data for use in SVS
- Exporting Data from GenomeStudio
- Platform Notes
- A Glossary of Terms Used in Genetic Analysis
- References
Visualizing Data
11 Visualizing Data
11.1Types of Plots Available
11.2Plot Viewer
11.3Genome Browser
11.4Opening the Plot Viewer
11.5Using the Graph Control Interface
11.6Using the Data Console
11.7Docking, Un-docking or Hiding Plot Viewer Subwindows
11.8Zooming in the Graph View
11.9Using LD Plots
11.10Haplotype Tables
11.11Heat Maps
11.12Creating Specialized Plots
11.13Genome Maps
11.2Plot Viewer
11.3Genome Browser
11.4Opening the Plot Viewer
11.5Using the Graph Control Interface
11.6Using the Data Console
11.7Docking, Un-docking or Hiding Plot Viewer Subwindows
11.8Zooming in the Graph View
11.9Using LD Plots
11.10Haplotype Tables
11.11Heat Maps
11.12Creating Specialized Plots
11.13Genome Maps
SVS provides a richly interactive visual interface to present and compare user data.