14 Linkage Disequilibrium View

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 14.1 Linkage Disequilibrium Overview
 14.2 Plotting Linkage Disequilibrium
  14.2.1 Stop Calculation/Stop Refresh and Resume Calculation/Resume Refresh
  14.2.2 Copy to Clipboard
  14.2.3 Plot Visual: Color or Black and White
  14.2.4 Fill Mode
  14.2.5 Zoom Mode
  14.2.6 Click on Graph
  14.2.7 Modify Color Scaling
 14.3 The File Menu
  14.3.1 Create Bitmap
  14.3.2 Print Image
  14.3.3 Summarize Data for All Points to CSV File
  14.3.4 Output Genotypes for Current Point to CSV File
  14.3.5 Output Genotype Combinations for Current Point
  14.3.6 Output Allele Counts for Current Point
  14.3.7 Output Allele Combinations for Current Point
  14.3.8 View Carlson-Method SNP Tags
 14.4 LD Computation
  14.4.1 LD Computation for D prime
  14.4.2 LD Computation for Quick Mode

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