Genomic infrastructure you own
Clinical insights you trust

Interpret, manage, and scale NGS workflows across
germline, oncology, prenatal, and pharmacogenomics.

Request EvaluationExplore Clinical Applications →

Clinical Variant Analysis and Interpretation Software

Deploy secure, scalable genomic variant analysis — from targeted panels to whole genomes — with integrated interpretation, automation, and data management. Built for diagnostic laboratories, hospitals, and genome centers that require performance, control, and clinical-grade reliability.

Institutions
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Clinical Variant Analysis, Unified in One Platform

Clinical Applications
Cancer
Cancer

Clinical interpretation of somatic variants aligned with AMP and ACMG guidelines.

Explore Precision Oncology →
Germline
Germline

Automated analysis and interpretation for gene panels, exomes, and whole genomes.

Explore Germline Analysis →
Pharmacogenomics
Pharmacogenomics

PGx variant and gene analysis based on CPIC and FDA recommendations.

Explore PGx Solutions →
Platform & Infrastructure
VarSeq Suite
VarSeq Suite

Clinical variant analysis, interpretation, and reporting in one integrated platform.

Explore VarSeq Suite →
VSWarehouse
VSWarehouse

Enterprise genomic data management for scalable clinical and research programs.

Explore VSWarehouse →
Sentieon
Sentieon

High-performance alignment and variant calling for production-scale sequencing.

View Secondary Analysis →

Your Data. Your Infrastructure. Your Control.

Run on-prem, in your private cloud, or air-gapped — Golden Helix never touches your patient data. Full data sovereignty developed under a ISO 13485-certified quality management system.

Security & Compliance→

Trusted by businesses worldwide.

Our software takes a user-centric approach to enable complex workflows to be done repeatedly and efficiently. Users praise the streamlined experience, time savings, and repeatability.

VarSeq is like so many birthday presents for my lab in one package!

Clinical Director

VarSeq is the best in the market. And for new features, the Development Team is always open for suggestions.

Head of Bioinformatics

The bioinformatic freedom is without parallels.

Lead Geneticist

My special thanks to the FAS team for their excellent support in helping us to design in-house workflows.

Head Analyst

Golden Helix provides a market-ready solution for whole exome sequence analysis in a clinical lab.

Martin Larsen - Associate Professor and Bioinformatician

The excellent support and training are a big reason we decided to go with Golden Helix.

Director of Genomics Core

We are impressed by the visualization capabilities of VarSeq.

Clinical Geneticist

Golden Helix's Clinical Reporting is better than anything we tested.

Bioinformatician

We are amazed that the analysis of cancer and germline samples is possible within one product.

Lab Director

We use Golden Helix training materials as our day bible running routine diagnostics.

Chief Data Officer

We are impressed by the ease of whole genome assay validation.

Head of Bioinformatics

We are impressed by the ease of whole genome assay validation.

Head of Bioinformatics

We use Golden Helix training materials as our day bible running routine diagnostics.

Chief Data Officer

We are amazed that the analysis of cancer and germline samples is possible within one product.

Lab Director

Golden Helix's Clinical Reporting is better than anything we tested.

Bioinformatician

We are impressed by the visualization capabilities of VarSeq.

Clinical Geneticist

The excellent support and training are a big reason we decided to go with Golden Helix.

Director of Genomics Core

Golden Helix provides a market-ready solution for whole exome sequence analysis in a clinical lab.

Martin Larsen - Associate Professor and Bioinformatician

My special thanks to the FAS team for their excellent support in helping us to design in-house workflows.

Head Analyst

The bioinformatic freedom is without parallels.

Lead Geneticist

VarSeq is the best in the market. And for new features, the Development Team is always open for suggestions.

Head of Bioinformatics

VarSeq is like so many birthday presents for my lab in one package!

Clinical Director

Golden Helix provides a market-ready solution for whole exome sequence analysis in a clinical lab.

Martin Larsen - Associate Professor and Bioinformatician

We are impressed by the ease of whole genome assay validation.

Head of Bioinformatics

The bioinformatic freedom is without parallels.

Lead Geneticist

We are amazed that the analysis of cancer and germline samples is possible within one product.

Lab Director

VarSeq is the best in the market. And for new features, the Development Team is always open for suggestions.

Head of Bioinformatics

Golden Helix's Clinical Reporting is better than anything we tested.

Bioinformatician

The excellent support and training are a big reason we decided to go with Golden Helix.

Director of Genomics Core

We are impressed by the visualization capabilities of VarSeq.

Clinical Geneticist

We use Golden Helix training materials as our day bible running routine diagnostics.

Chief Data Officer

My special thanks to the FAS team for their excellent support in helping us to design in-house workflows.

Head Analyst

VarSeq is like so many birthday presents for my lab in one package!

Clinical Director

News, Events and Genomic Deep Dives

Our blog is a rich and current feed of product tips, genomic deep dives and company announcements.

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Build Your Clinical Genomics Platform With Confidence

Connect with our team to explore deployment models, licensing options, and scalable variant interpretation.

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