Automating Pharmacogenomic Workflows with VSWarehouse 3 From Variants to Clinical Reports

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About this webcast

July 23, 2025 // 12:00 EST

Presented By: Nate Fortier, Director of Research

Pharmacogenomics (PGx) testing has become an essential component of precision medicine, enabling clinicians to optimize drug selection and dosing based on a patient's genetic makeup. However, the complexity of PGx analysis presents significant challenges for laboratories seeking to implement scalable, automated workflows. Traditional manual approaches are time-consuming, error-prone, and difficult to standardize across different clinical contexts.
This webcast demonstrates how VSWarehouse 3 addresses these challenges by providing a comprehensive platform for automating PGx workflows from raw NGS data to clinical reports. Through VSPipeline integration, VSWarehouse 3 enables laboratories to create fully automated, repeatable workflows that handle the entire PGx analysis pipeline, including star allele calling, diplotype determination, CPIC guideline application, and report generation.
In this session, we will:

  • Leverage VSWarehouse 3 to automate PGx workflows
  • Interpret the PGx reports generated by VarSeq
  • Review the output of the PGx algorithm in VarSeq from VSWarehouse 3
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